STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87519.1Putative Pyridoxamine 5'-phosphate oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (154 aa)    
Predicted Functional Partners:
CCH87404.1
Putative reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.636
CCH86807.1
Homologs of previously reported genes of unknown function.
  
     0.590
CCH87520.1
Homologs of previously reported genes of unknown function.
       0.581
CCH87521.1
Homologs of previously reported genes of unknown function.
       0.581
CCH86579.1
Putative CsbD stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the UPF0337 (CsbD) family.
  
    0.573
CCH87517.1
Putative ATP-grasp superfamily enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.545
CCH87518.1
Permease; Function of strongly homologous gene; transporter.
       0.545
CCH88963.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.545
CCH87414.1
Homologs of previously reported genes of unknown function.
  
     0.511
CCH90946.1
Homologs of previously reported genes of unknown function.
  
     0.487
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.