STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87527.1Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter. (459 aa)    
Predicted Functional Partners:
CCH86730.1
Transmembrane efflux protein, EmrB/QacA subfamily; Function of strongly homologous gene; transporter; Belongs to the major facilitator superfamily.
  
     0.731
CCH86545.1
Arabinose efflux permease; Function of strongly homologous gene; transporter.
  
     0.724
CCH90117.1
Major facilitator superfamily MFS_1 (modular protein); Function of strongly homologous gene; transporter.
  
     0.724
CCH87884.1
Putative multidrug resistance transporter, MFS family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.606
CCH89883.1
Major Facilitator Superfamily arabinose transporter; Function of strongly homologous gene; transporter.
  
     0.603
CCH88301.1
Major facilitator superfamily MFS_1; Function of strongly homologous gene; transporter.
  
     0.598
CCH87528.1
Alpha amylase; Function of strongly homologous gene; enzyme.
 
     0.575
CCH87529.1
Transporter, MFS superfamily; Function of strongly homologous gene; transporter.
       0.441
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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