STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87528.1Alpha amylase; Function of strongly homologous gene; enzyme. (435 aa)    
Predicted Functional Partners:
CCH89898.1
Putative trehalose biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 0.854
glgP
Glycogen phosphorylase; Function of strongly homologous gene; enzyme.
  
 0.819
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.813
CCH88689.1
4-alpha-glucanotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.792
treY
Maltooligosyl trehalose synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.778
glgX
Glycosyl hydrolase (glycogen debranching enzyme); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.741
glgX-2
Glycosyl hydrolase (glycogen debranching enzyme); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.741
treS
Trehalose synthase (Maltose alpha-D-glucosyltransferase); Function of strongly homologous gene; enzyme.
 
  
 
0.703
CCH87529.1
Transporter, MFS superfamily; Function of strongly homologous gene; transporter.
       0.648
treS-2
Trehalose synthase; Function of strongly homologous gene; enzyme.
    
  0.622
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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