STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahsAllophanate hydrolase, subunit2; Function of strongly homologous gene; enzyme. (279 aa)    
Predicted Functional Partners:
CCH87536.1
Allophanate hydrolase subunit 1; Function of strongly homologous gene; enzyme.
 
 0.999
pxpA
Putative lactam utilization protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
 0.998
CCH87538.1
Mn2+/Fe2_transporter, NRAMP family; Function of strongly homologous gene; transporter.
  
 0.963
CCH87539.1
Homologs of previously reported genes of unknown function; Belongs to the D-glutamate cyclase family.
    0.940
CCH86900.1
Acetyl/propionyl-CoA carboxylase, alpha subunit; Function of strongly homologous gene; enzyme.
 
  
 0.919
bccA
Acetyl-/propionyl-coenzyme A carboxylase alpha chain [Biotin carboxylase; Function of strongly homologous gene; enzyme.
 
  
 0.919
accC
Carbamoyl-phosphate synthase L chain ATP-binding protein; Function of strongly homologous gene; enzyme.
 
  
 0.912
iaaH
Indoleacetamide hydrolase; Function of strongly homologous gene; enzyme; Belongs to the amidase family.
    
 0.908
amiD
Amidase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the amidase family.
    
 0.908
CCH90662.1
Putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the amidase family.
    
 0.908
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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