STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87551.1Homologs of previously reported genes of unknown function. (245 aa)    
Predicted Functional Partners:
CCH86116.1
Conserved protein of unknown function, putative Tetratricopeptide domain; Homologs of previously reported genes of unknown function.
 
 
 
 0.757
ftsX
Cell division protein ftsX homolog; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.597
CCH89683.1
Phosphoesterase PA-phosphatase; Function of strongly homologous gene; enzyme.
 
     0.549
CCH90198.1
2'-5' RNA ligase; Function of strongly homologous gene; enzyme.
  
     0.542
CCH89328.1
Homologs of previously reported genes of unknown function.
  
     0.536
CCH87552.1
Homologs of previously reported genes of unknown function; Belongs to the UPF0312 family.
   
   0.502
CCH86315.1
Homologs of previously reported genes of unknown function.
 
    0.469
CCH89724.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.468
CCH90047.1
Homologs of previously reported genes of unknown function.
  
     0.459
CCH88858.1
YGGT family protein; Homologs of previously reported genes of unknown function.
 
 
   0.448
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.