STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87584.1Homologs of previously reported genes of unknown function. (306 aa)    
Predicted Functional Partners:
CCH87585.1
Sulfotransferase.
 
   
 0.921
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
  
  
 0.774
CCH86774.1
Homologs of previously reported genes of unknown function.
  
   
 0.527
CCH88443.1
PTS system, beta-glucoside-specific IIABC component; Function of strongly homologous gene; enzyme.
  
  
 0.519
pepE
Peptidase S51 dipeptidase E; Function of strongly homologous gene; enzyme; Belongs to the peptidase S51 family.
  
     0.508
CCH87586.1
Carbonic anhydrase; Function of strongly homologous gene; enzyme.
  
    0.504
CCH87587.1
Homologs of previously reported genes of unknown function.
       0.497
CCH86117.1
Homologs of previously reported genes of unknown function.
  
     0.463
CCH89659.1
Homologs of previously reported genes of unknown function.
  
     0.432
CCH87304.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.421
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.