STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87588.1Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (565 aa)    
Predicted Functional Partners:
CCH90867.1
HNH endonuclease; Function of strongly homologous gene; enzyme.
  
     0.771
CCH90919.1
HNH endonuclease.
  
     0.765
CCH88758.1
Homologs of previously reported genes of unknown function.
 
     0.628
metH
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.572
CCH86576.1
Homologs of previously reported genes of unknown function.
 
     0.564
CCH86392.1
Homologs of previously reported genes of unknown function.
 
     0.548
CCH90264.1
Integrase catalytic region; Function of strongly homologous gene; enzyme.
  
     0.494
CCH86309.1
Homologs of previously reported genes of unknown function.
  
     0.478
CCH87589.1
ABC transporter, solute binding protein; Function of strongly homologous gene; transporter.
       0.475
CCH90263.1
Integrase, catalytic core; Function of strongly homologous gene; enzyme.
  
     0.469
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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