STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87610.1Homologs of previously reported genes of unknown function. (186 aa)    
Predicted Functional Partners:
CCH87607.1
Homologs of previously reported genes of unknown function.
 
     0.890
CCH87609.1
Putative esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
    0.760
CCH88155.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
  
     0.659
CCH87608.1
Fumarylacetoacetate hydrolase family protein; Function of strongly homologous gene; enzyme.
 
    0.631
CCH87618.1
Extracellular solute-binding protein family 5; Function of strongly homologous gene; transporter.
  
     0.621
CCH87611.1
Putative Dihydrodipicolinate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DapA family.
   
   0.570
CCH87626.1
Inosine/uridine-preferring nucleoside hydrolase; Function of strongly homologous gene; enzyme.
  
     0.560
CCH88327.1
Homologs of previously reported genes of unknown function.
  
     0.544
CCH87606.1
FAD-binding monooxygenase.
 
     0.528
CCH88182.1
Inosine-uridine preferring nucleoside hydrolase; Function of strongly homologous gene; enzyme.
  
     0.502
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.