STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87627.1Glycoside hydrolase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family. (796 aa)    
Predicted Functional Partners:
CCH87625.1
Beta-xylosidase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.867
CCH87622.1
Alpha-L-rhamnosidase; Function of strongly homologous gene; enzyme.
 
 
 0.837
CCH87624.1
alpha-L-rhamnosidase A; Function of strongly homologous gene; enzyme.
 
 
 0.817
uidA-3
Beta-glucuronidase; Function of strongly homologous gene; enzyme.
  
   
 0.817
CCH88187.1
Glycoside hydrolase; Function of strongly homologous gene; enzyme.
 
 
 0.801
CCH88186.1
Beta-xylosidase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.766
CCH88399.1
Xylosidase/arabinosidase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.760
CCH88160.1
Glycoside hydrolase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.718
CCH88402.1
Alpha-L-rhamnosidase; Function of strongly homologous gene; enzyme.
 
 
 0.663
CCH87760.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
 
 0.581
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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