STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
hutIImidazolonepropionase; Function of strongly homologous gene; enzyme. (383 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase (Urocanase) (Imidazolonepropionate hydrolase); Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.999
hutH
Histidine ammonia-lyase (Histidase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
  
 0.993
CCH87654.1
N-carbamoyl-L-amino-acid hydrolase; Function of strongly homologous gene; enzyme.
 
 
 0.965
CCH88587.1
Arginase; Function of strongly homologous gene; enzyme; Belongs to the arginase family.
  
 
 0.776
CCH87657.1
Transcriptional regulator, IclR family; Function of strongly homologous gene; regulator.
 
  
 0.703
CCH87658.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; cell process.
       0.413
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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