STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87661.1Truncated hemoglobins-like protein. (253 aa)    
Predicted Functional Partners:
CCH87514.1
Oxidoreductase FAD-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the globin family.
     
 0.543
CCH88679.1
Putative isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
    0.534
CCH87659.1
Protein of unknown function; No homology to any previously reported sequences.
  
    0.530
CCH89434.1
Thioredoxin reductase (NADPH); Function of strongly homologous gene; enzyme.
 
 
 0.512
CCH89435.1
Two-component sensor histidine kinase; Function of strongly homologous gene; enzyme.
 
   
 0.488
trxB
Two component thioredoxin reductase carring response regulator; Function of strongly homologous gene; enzyme.
 
 
  0.469
CCH87462.1
Putative membrane protein of unknown function; No homology to any previously reported sequences.
 
    0.450
CCH89098.1
Transcriptional regulator, MarR family; Function of strongly homologous gene; factor.
 
    0.444
CCH87733.1
Sensor kinase, two-component system; Function of strongly homologous gene; enzyme.
  
     0.433
CCH89464.1
Putative AAA+ family ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.412
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.