STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xdhBXanthine dehydrogenase medium chain, FAD-binding; Function of strongly homologous gene; enzyme. (337 aa)    
Predicted Functional Partners:
xdhC-2
Xanthine dehydrogenase, small subunit, 2Fe-2S ferredoxin, iron-sulphur binding; Function of strongly homologous gene; enzyme.
 0.996
xdhA-2
Xanthine dehydrogenase, molybdenum binding subunit apoprotein, molybdopterin binding; Function of strongly homologous gene; enzyme.
 0.996
CCH87822.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; Function of strongly homologous gene; enzyme.
 
 0.771
uox
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
    
 0.762
add
Adenosine deaminase 3; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
    
  0.747
rihC
Non-specific ribonucleoside hydrolase rihC; Function of strongly homologous gene; enzyme.
     
  0.741
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
  0.741
punA
Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
  0.741
xdhA
Xanthine dehydrogenase, molybdenum binding subunit apoprotein, molybdopterin binding; Function of strongly homologous gene; enzyme.
 
 0.727
coxL-2
Carbon-monoxide dehydrogenase, molybdopterin binding, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.699
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.