STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87670.1Homologs of previously reported genes of unknown function. (200 aa)    
Predicted Functional Partners:
CCH87524.1
Homologs of previously reported genes of unknown function.
      0.624
fdh-5
Formaldehyde dehydrogenase; Function of strongly homologous gene; enzyme.
       0.578
CCH87672.1
Homologs of previously reported genes of unknown function.
       0.562
CCH89913.1
Homologs of previously reported genes of unknown function.
 
     0.560
CCH88882.1
Glycosyl transferase family 2 (fragment); Function of strongly homologous gene; enzyme.
  
     0.530
CCH87669.1
Cytochrome P450; Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
       0.515
CCH88885.1
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.477
CCH87673.1
Homologs of previously reported genes of unknown function.
       0.463
CCH90392.1
Homologs of previously reported genes of unknown function.
  
     0.454
moaD-2
Molybdenum cofactor biosynthesis protein D (MoaD); Function of strongly homologous gene; enzyme.
  
     0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.