STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
CCH87677.1Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (319 aa)    
Predicted Functional Partners:
CCH86531.1
Threonine dehydrogenase-like Zn-dependent dehydrogenase; Function of strongly homologous gene; enzyme.
 
  0.955
suhB
Inositol-1-monophosphatase; Function of strongly homologous gene; enzyme; Belongs to the inositol monophosphatase superfamily.
    
 0.904
CCH86324.1
Oxidoreductase; Function of strongly homologous gene; enzyme.
  
     0.754
CCH88391.1
Oxidoreductase; Function of strongly homologous gene; enzyme.
  
     0.719
CCH88164.1
Homologs of previously reported genes of unknown function.
 
 
 0.668
CCH86221.1
Putative Oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.663
CCH86530.1
Dehydrogenase; Function of strongly homologous gene; enzyme.
     
  0.639
CCH87605.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.620
CCH86238.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.605
CCH89915.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.604
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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