STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CCH87690.1Putative Alpha-methylacyl-CoA racemase (2-methylacyl-CoA racemase) (2-arylpropionyl-CoA epimerase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the CoA-transferase III family. (381 aa)    
Predicted Functional Partners:
ftsH-2
Cell division protease ftsH homolog 4; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.658
CCH87691.1
Major facilitator superfamily MFS_1 (fragment); Function of strongly homologous gene; transporter.
       0.590
CCH87692.1
Major facilitator superfamily MFS_1 (fragment); Function of strongly homologous gene; transporter.
       0.590
argH
Argininosuccinate lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
      0.537
CCH89628.1
Putative acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.501
CCH90091.1
3-hydroxyacyl-CoA dehydrogenase (short-chain); Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
   0.483
CCH90901.1
Hydroxymethylglutaryl-CoA lyase; Function of strongly homologous gene; enzyme.
 
  0.453
CCH86055.1
NUDIX hydrolase; Function of strongly homologous gene; enzyme.
  
    0.445
CCH87693.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
  
    0.410
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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