STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87704.1Putative xylitol oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (423 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Function of strongly homologous gene; enzyme; Belongs to the xylose isomerase family.
 
  
  0.921
CCH87825.1
Alcohol dehydrogenase, zinc-binding domain protein; Function of strongly homologous gene; enzyme.
     
  0.900
CCH88335.1
Alcohol dehydrogenase GroES domain protein; Function of strongly homologous gene; enzyme.
     
  0.900
CCH90687.1
Putative L-threonine 3-dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     
  0.900
CCH87627.1
Glycoside hydrolase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family.
    
  0.801
CCH88400.1
Glycoside hydrolase family 2 sugar binding; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family.
    
  0.801
glcK
Glucokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
  0.800
CCH87705.1
Transcriptional regulator, ArsR family; Function of strongly homologous gene; regulator.
       0.553
CCH87706.1
Activator of Hsp90 ATPase 1 family protein; Function of strongly homologous gene; cell process.
       0.553
CCH86819.1
Homologs of previously reported genes of unknown function.
 
    0.464
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.