STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87733.1Sensor kinase, two-component system; Function of strongly homologous gene; enzyme. (460 aa)    
Predicted Functional Partners:
CCH89434.1
Thioredoxin reductase (NADPH); Function of strongly homologous gene; enzyme.
 
 
 0.874
trxB
Two component thioredoxin reductase carring response regulator; Function of strongly homologous gene; enzyme.
 
 
 0.848
CCH86704.1
Thioredoxin-disulfide reductase; Function of strongly homologous gene; enzyme.
  
  
 0.783
CCH90658.1
Sensor protein with an histidine kinase signal transduction domain; Function of strongly homologous gene; regulator.
 
 0.721
CCH90729.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.689
CCH86877.1
Bacteriophytochrome (Light-regulated signal transduction histidine kinase); Function of strongly homologous gene; enzyme.
 
 0.651
mprA
Response regulator mprA; Function of strongly homologous gene; regulator.
 
 0.642
sucA
2-oxoglutarate decarboxylase; Function of strongly homologous gene; enzyme.
  
 0.605
pdhB
Pyruvate dehydrogenase E1 component subunit beta; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
 0.574
CCH87734.1
Homologs of previously reported genes of unknown function.
  
  
 0.560
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.