STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87748.1Homologs of previously reported genes of unknown function; Belongs to the UPF0255 family. (392 aa)    
Predicted Functional Partners:
CCH87750.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
     0.951
CCH87751.1
Monooxygenase FAD-binding; Function of strongly homologous gene; enzyme.
 
     0.915
CCH87752.1
Putative cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.844
CCH87753.1
Transcriptional regulator, lysR-family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.843
CCH87749.1
Fumarylacetoacetase; Function of strongly homologous gene; enzyme.
 
     0.829
CCH87747.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; cell process.
       0.773
CCH87754.1
Major facilitator family sugar transporter; Function of strongly homologous gene; transporter.
 
    0.732
CCH88180.1
FAD-binding monooxygenase; Function of strongly homologous gene; enzyme.
  
     0.727
CCH88254.1
4-oxalomesaconate hydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
     0.613
ligB-2
Protocatechuate 4,5-dioxygenase, beta chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.611
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.