STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
CCH87752.1Putative cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (331 aa)    
Predicted Functional Partners:
CCH87751.1
Monooxygenase FAD-binding; Function of strongly homologous gene; enzyme.
 
  
  0.947
CCH87750.1
Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.925
CCH87749.1
Fumarylacetoacetase; Function of strongly homologous gene; enzyme.
 
     0.897
CCH87753.1
Transcriptional regulator, lysR-family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.876
CCH87748.1
Homologs of previously reported genes of unknown function; Belongs to the UPF0255 family.
 
     0.839
kynU
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.825
CCH85609.1
Monooxygenase FAD-binding protein.
    
  0.755
CCH87754.1
Major facilitator family sugar transporter; Function of strongly homologous gene; transporter.
 
    0.705
CCH87747.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; cell process.
     
 0.670
fdhA2
Formate dehydrogenase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.663
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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