STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87769.1Homologs of previously reported genes of unknown function. (194 aa)    
Predicted Functional Partners:
CCH86320.1
Putative deacetylase, LmbE family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.754
CCH86323.1
Homologs of previously reported genes of unknown function.
  
     0.738
CCH86321.1
Glycosyl transferase; Function of strongly homologous gene; enzyme.
  
     0.726
CCH90583.1
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.688
CCH86322.1
Homologs of previously reported genes of unknown function.
  
     0.654
CCH87768.1
Enoyl-CoA hydratase/carnithine racemase; Function of strongly homologous gene; enzyme.
       0.651
CCH89640.1
Homologs of previously reported genes of unknown function.
  
     0.642
CCH87770.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; Function of strongly homologous gene; transporter.
       0.623
CCH87771.1
Copper transport ATP-binding protein; Function of strongly homologous gene; transporter.
       0.623
CCH87772.1
Homologs of previously reported genes of unknown function.
       0.623
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.