STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87770.1ABC-type transport system involved in multi-copper enzyme maturation, permease component; Function of strongly homologous gene; transporter. (284 aa)    
Predicted Functional Partners:
CCH87771.1
Copper transport ATP-binding protein; Function of strongly homologous gene; transporter.
 
   0.958
CCH87772.1
Homologs of previously reported genes of unknown function.
 
     0.958
CCH87773.1
RNA polymerase sigma factor, sigma-70 family (fragment); Function of strongly homologous gene; factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
    0.939
CCH87769.1
Homologs of previously reported genes of unknown function.
       0.623
CCH87768.1
Enoyl-CoA hydratase/carnithine racemase; Function of strongly homologous gene; enzyme.
       0.530
CCH89391.1
Homologs of previously reported genes of unknown function.
  
     0.508
CCH87774.1
Protein of unknown function; No homology to any previously reported sequences.
       0.471
CCH86854.1
Homologs of previously reported genes of unknown function.
  
     0.448
CCH86774.1
Homologs of previously reported genes of unknown function.
  
     0.427
CCH85855.1
Homologs of previously reported genes of unknown function.
  
     0.404
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.