STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87771.1Copper transport ATP-binding protein; Function of strongly homologous gene; transporter. (333 aa)    
Predicted Functional Partners:
CCH87770.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component; Function of strongly homologous gene; transporter.
 
   0.958
CCH87772.1
Homologs of previously reported genes of unknown function.
 
    0.946
MODMU_2354
Fragment of putative modular protein: ATP-binding protein (ABC transporter component)(N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
0.905
CCH87773.1
RNA polymerase sigma factor, sigma-70 family (fragment); Function of strongly homologous gene; factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.859
CCH89426.1
ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
     
0.765
CCH88343.1
ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
     
0.735
CCH87769.1
Homologs of previously reported genes of unknown function.
       0.623
ugpC
Glycerol-3-phosphate ABC transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
    
0.574
CCH87768.1
Enoyl-CoA hydratase/carnithine racemase; Function of strongly homologous gene; enzyme.
  
    0.530
CCH87774.1
Protein of unknown function; No homology to any previously reported sequences.
       0.471
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.