STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87817.1Aryl-alcohol dehydrogenase; Function of strongly homologous gene; enzyme. (370 aa)    
Predicted Functional Partners:
CCH89662.1
Aldehyde dehydrogenase [NAD+]; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
 
 0.913
xylB
Aryl-alcohol dehydrogenase; Function of strongly homologous gene; enzyme.
  
  
 
0.905
maoI
Primary amine oxidase; Function of strongly homologous gene; enzyme.
     
 0.900
CCH89603.1
Primary amine oxidase; Function of strongly homologous gene; enzyme.
     
 0.900
CCH87818.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
 
   0.786
CCH87819.1
Beta-lactamase domain protein; Function of strongly homologous gene; cell process.
  
    0.654
CCH87613.1
Alcohol dehydrogenase.
 
 
 
 0.634
adhfe
Alcohol dehydrogenase, iron-type; Function of strongly homologous gene; enzyme.
   
 
 0.487
CCH87825.1
Alcohol dehydrogenase, zinc-binding domain protein; Function of strongly homologous gene; enzyme.
 
   
0.467
CCH87816.1
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.463
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.