STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87819.1Beta-lactamase domain protein; Function of strongly homologous gene; cell process. (290 aa)    
Predicted Functional Partners:
CCH87818.1
Short-chain dehydrogenase/reductase SDR; Function of strongly homologous gene; enzyme.
   
  0.697
CCH87817.1
Aryl-alcohol dehydrogenase; Function of strongly homologous gene; enzyme.
  
    0.653
moeB
Molybdopterin-synthase sulfurylase; Function of strongly homologous gene; enzyme.
  
 0.533
CCH87820.1
Putative phosphoglycerate mutase gpmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.474
CCH87783.1
Phosphoenolpyruvate-utilising enzyme, mobile region; Function of strongly homologous gene; enzyme.
  
   
 0.455
CCH87718.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.454
CCH87454.1
Homologs of previously reported genes of unknown function.
  
     0.435
CCH89291.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; cell process.
  
  0.420
mmgB
3-hydroxybutyryl-CoA dehydrogenase; Function of strongly homologous gene; enzyme.
  
 
  0.409
CCH89910.1
3-hydroxyacyl-CoA dehydrogenase; Function of strongly homologous gene; enzyme.
  
 
  0.409
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.