Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH87824.1Xanthine dehydrogenase FAD-binding subunit; Function of strongly homologous gene; enzyme. (284 aa)    
Predicted Functional Partners:
CCH87823.1
Putative xanthine dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.995
xdhC
Xanthine dehydrogenase, small subunit, 2Fe-2S ferredoxin, iron-sulphur binding; Function of strongly homologous gene; enzyme.
 0.986
coxS-3
Carbon-monoxide dehydrogenase Fe-S binding small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.983
coxS-2
Carbon-monoxide dehydrogenase, Fe-S binding, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.981
CCH87822.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; Function of strongly homologous gene; enzyme.
 0.980
coxS
Carbon-monoxide dehydrogenase, Fe-S binding, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.969
xdhA
Xanthine dehydrogenase, molybdenum binding subunit apoprotein, molybdopterin binding; Function of strongly homologous gene; enzyme.
 0.935
coxL-3
Carbon-monoxide dehydrogenase, molybdopterin binding, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.907
coxL
Carbon-monoxide dehydrogenase, molybdopterin binding, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 0.902
CCH89500.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.897
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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