STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpICation-transporting ATPase I; Function of strongly homologous gene; enzyme. (1510 aa)    
Predicted Functional Partners:
CCH87830.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
    0.627
CCH87828.1
Putative cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.528
CCH88308.1
Two component signal transduction serine/threonine kinase; Function of strongly homologous gene; regulator.
  
    0.483
CCH90928.1
Protein of unknown function; No homology to any previously reported sequences.
 
    0.474
CCH86534.1
Glycosyltransferase; Function of strongly homologous gene; enzyme.
  
 
 
 0.465
CCH88979.1
Putative ATP/GTP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
 0.465
adhfe
Alcohol dehydrogenase, iron-type; Function of strongly homologous gene; enzyme.
  
   0.464
CCH90153.1
Peptidase S8 and S53 subtilisin kexin sedolisin; Function of strongly homologous gene; enzyme.
  
 0.461
CCH87930.1
Protein of unknown function; No homology to any previously reported sequences.
  
 
  0.451
atpE
ATP synthase, subunit c, F0 sector; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.450
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.