STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87876.1Putative Major facilitator superfamily MFS_1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (564 aa)    
Predicted Functional Partners:
CCH87877.1
Homologs of previously reported genes of unknown function.
 
 0.933
CCH90928.1
Protein of unknown function; No homology to any previously reported sequences.
 
    0.707
CCH86817.1
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier.
  
     0.665
CCH87830.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
   
 0.660
CCH85625.1
Exported protein of unknown function; No homology to any previously reported sequences.
 
   
 0.644
CCH89640.1
Homologs of previously reported genes of unknown function.
  
     0.604
ubiG
3-demethylubiquinone-9 3-methyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
     0.603
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.599
CCH88979.1
Putative ATP/GTP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 0.570
CCH87124.1
Homologs of previously reported genes of unknown function.
  
    0.558
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.