STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87897.1Cytochrome P450; Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family. (444 aa)    
Predicted Functional Partners:
pobB-2
Phthalate 4,5-dioxygenase; Function of strongly homologous gene; enzyme.
 0.952
pobB
Phenoxybenzoate dioxygenase subunit beta; Function of strongly homologous gene; enzyme.
 0.945
CCH87898.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
  
   0.789
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.702
CCH85874.1
Acetoacetyl-CoA synthase; Function of strongly homologous gene; enzyme.
  
 
 0.678
CCH87895.1
Monooxygenase FAD-binding protein; Function of strongly homologous gene; enzyme.
  
 
 0.618
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
 
0.592
fprA
NADPH-ferredoxin reductase fprA; Function of strongly homologous gene; enzyme.
 
   
 0.530
CCH87896.1
Putative Metallo-beta-lactamase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.518
CCH88323.1
Ferredoxin reductase; Function of strongly homologous gene; enzyme.
 
  
 0.504
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.