STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucPL-fucose-proton symporter; Function of strongly homologous gene; transporter. (445 aa)    
Predicted Functional Partners:
CCH87902.1
Ribokinase; Function of strongly homologous gene; enzyme; Belongs to the carbohydrate kinase PfkB family.
     
 0.628
CCH90858.1
Homologs of previously reported genes of unknown function.
  
  
 0.627
CCH87900.1
Homologs of previously reported genes of unknown function.
       0.493
CCH90608.1
PTS system, fructose subfamily, IIC subunit; Function of strongly homologous gene; transporter.
   
  
 0.490
glgC-3
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
       0.454
CCH88181.1
Glycoside hydrolase family 2, sugar binding; Function of strongly homologous gene; enzyme.
  
     0.434
CCH88400.1
Glycoside hydrolase family 2 sugar binding; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 2 family.
 
   
 0.406
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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