STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87937.1Peptidase M28; Function of strongly homologous gene; enzyme. (578 aa)    
Predicted Functional Partners:
CCH87936.1
Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.787
CCH88377.1
Carboxylesterase; Function of strongly homologous gene; enzyme; Belongs to the type-B carboxylesterase/lipase family.
  
 0.598
CCH88390.1
Carboxylesterase; Function of strongly homologous gene; enzyme.
  
 0.598
CCH88979.1
Putative ATP/GTP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
 0.577
CCH87938.1
Transcriptional regulator, SARP family; Function of strongly homologous gene; regulator.
 
     0.553
CCH89570.1
(Serine-type) D-alanyl-D-alanine carboxypeptidase; Function of strongly homologous gene; enzyme.
  
     0.491
CCH88989.1
AAA ATPase, central domain protein; Function of strongly homologous gene; enzyme.
  
  
  0.453
pld
Function of strongly homologous gene; enzyme.
    
 0.435
CCH88484.1
Phospholipase D/Transphosphatidylase (fragment); Function of strongly homologous gene; enzyme.
    
 0.435
CCH89608.1
Subtilisin-like peptidase; Function of strongly homologous gene; enzyme.
  
   
 0.424
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.