STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Cooccurrence
Coexpression
Experiments
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[Homology]
Score
CCH87945.1Putative zinc metalloendopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (290 aa)    
Predicted Functional Partners:
CCH87946.1
Homologs of previously reported genes of unknown function.
       0.773
CCH90203.1
Homologs of previously reported genes of unknown function.
  
    0.546
nadE-2
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
  0.502
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.435
CCH87944.1
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.435
CCH86433.1
Lysophospholipase L1-like esterase; Function of strongly homologous gene; enzyme.
  
 0.434
CCH86550.1
Lipolytic G-D-S-L Esterase; Function of strongly homologous gene; enzyme.
  
 0.434
CCH86923.1
Lipolytic protein G-D-S-L family.
  
 0.434
CCH87636.1
Homologs of previously reported genes of unknown function.
  
 0.434
CCH90113.1
Homologs of previously reported genes of unknown function.
  
 0.434
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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