STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCH87947.1Putative galactose oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (726 aa)    
Predicted Functional Partners:
CCH86774.1
Homologs of previously reported genes of unknown function.
  
  
  0.548
glgP
Glycogen phosphorylase; Function of strongly homologous gene; enzyme.
   
    0.537
CCH89898.1
Putative trehalose biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
   
    0.533
CCH87936.1
Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
  0.526
CCH87932.1
Homologs of previously reported genes of unknown function.
  
     0.510
CCH86415.1
Conserved secreted protein of unknown function, putative PKD domains; Homologs of previously reported genes of unknown function.
    
  0.486
glgX
Glycosyl hydrolase (glycogen debranching enzyme); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 13 family.
   
    0.477
glgX-2
Glycosyl hydrolase (glycogen debranching enzyme); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glycosyl hydrolase 13 family.
   
    0.477
CCH90928.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.459
CCH87948.1
Homologs of previously reported genes of unknown function.
       0.436
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.