STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH87949.1Peptidase S8 and S53, subtilisin, kexin, sedolisin (modular protein); Function of strongly homologous gene; enzyme. (930 aa)    
Predicted Functional Partners:
CCH87948.1
Homologs of previously reported genes of unknown function.
      0.729
CCH87950.1
Homologs of previously reported genes of unknown function.
       0.601
CCH87951.1
Homologs of previously reported genes of unknown function.
       0.601
CCH90153.1
Peptidase S8 and S53 subtilisin kexin sedolisin; Function of strongly homologous gene; enzyme.
  
     0.536
CCH89608.1
Subtilisin-like peptidase; Function of strongly homologous gene; enzyme.
  
     0.455
CCH87952.1
Homologs of previously reported genes of unknown function.
  
    0.416
CCH87953.1
Putative response regulator receiver protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
    0.416
CCH87940.1
Heme peroxidase (Animal); Function of strongly homologous gene; enzyme.
 
  
 0.414
CCH88960.1
Homologs of previously reported genes of unknown function.
  
 0.406
CCH90052.1
Putative cell division-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 
 0.402
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.