STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88020.1Putative ATP-grasp superfamily enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (287 aa)    
Predicted Functional Partners:
metH
B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.702
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
     0.642
CCH87598.1
Homologs of previously reported genes of unknown function.
  
    0.607
CCH88022.1
Putative haloacid dehalogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
     0.595
CCH90321.1
Acyl dehydratase; Function of strongly homologous gene; enzyme; Belongs to the UPF0336 family.
  
     0.587
MODMU_3642
Fragment of Zn-dependent hydrolase, glyoxylase (part 1); Function of strongly homologous gene; enzyme.
   
    0.540
qcrC
Ubiquinol-cytochrome c reductase cytochrome c subunit; Function of strongly homologous gene; enzyme.
  
     0.473
CCH88098.1
Transcriptional regulator, MerR family; Function of strongly homologous gene; regulator.
  
     0.445
CCH90005.1
Homologs of previously reported genes of unknown function.
  
   
 0.439
CCH90308.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.426
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.