Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CCH88052.12-keto-3-deoxy-L-rhamnonate aldolase; Function of strongly homologous gene; enzyme; Belongs to the HpcH/HpaI aldolase family. (223 aa)    
Predicted Functional Partners:
CCH89662.1
Aldehyde dehydrogenase [NAD+]; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 
 0.815
CCH86220.1
Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.748
CCH88166.1
Hydroxypyruvate isomerase; Function of strongly homologous gene; enzyme; Belongs to the hyi family.
    
  0.720
ald-2
Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family.
  
 
 0.657
gabD
Succinate-semialdehyde dehydrogenase [NADP+] 1; Function of strongly homologous gene; enzyme.
  
 
 0.622
gabD1
Succinate-semialdehyde dehydrogenase [NADP+]; Function of strongly homologous gene; enzyme.
  
 
 0.622
CCH89975.1
Succinate-semialdehyde dehydrogenase [NADP+]; Function of strongly homologous gene; enzyme.
  
 
 0.622
CCH86269.1
Putative Mandelate racemase/muconate lactonizing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.619
CCH88053.1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Function of strongly homologous gene; enzyme.
       0.603
CCH88255.1
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; Function of strongly homologous gene; enzyme.
  
 
 0.545
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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