STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88054.1Lipase maturation factor 1; Function of strongly homologous gene; enzyme. (482 aa)    
Predicted Functional Partners:
CCH88055.1
Acetyltransferase; Function of strongly homologous gene; enzyme.
       0.727
CCH88056.1
Homologs of previously reported genes of unknown function.
       0.571
kamA
Lysine 2,3-aminomutase; Function of strongly homologous gene; enzyme.
       0.497
sucD-2
succinyl-CoA synthetase, alpha subunit, NAD(P)-binding; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
 
      0.496
CCH86562.1
Homologs of previously reported genes of unknown function.
 
     0.492
CCH85919.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.455
CCH85542.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.443
CCH87713.1
HNH endonuclease (fragment); Function of strongly homologous gene; enzyme.
  
    0.422
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.