STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88065.1Homologs of previously reported genes of unknown function. (174 aa)    
Predicted Functional Partners:
CCH88059.1
Amidohydrolase; Function of strongly homologous gene; enzyme.
  
    0.852
CCH88064.1
Dolichyl-phosphate beta-D-mannosyltransferase; Function of strongly homologous gene; enzyme.
  
    0.752
lnt-4
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
    0.703
CCH89382.1
Molecular chaperone (Small heat shock protein); Function of strongly homologous gene; structure; Belongs to the small heat shock protein (HSP20) family.
   
    0.537
serB
Phosphoserine phosphatase; Function of strongly homologous gene; enzyme.
 
     0.471
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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