STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88075.1Homologs of previously reported genes of unknown function. (120 aa)    
Predicted Functional Partners:
CCH88074.1
Isochorismatase hydrolase; Function of strongly homologous gene; enzyme.
  
    0.610
CCH89854.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.567
vapC
Cytotoxic translational repressor of toxin-antitoxin stability system, Putative toxin of TAS system; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.538
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.440
CCH86236.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Function of strongly homologous gene; enzyme.
  
     0.420
CCH86092.1
Homologs of previously reported genes of unknown function.
  
     0.412
CCH85771.1
Homologs of previously reported genes of unknown function.
 
     0.409
CCH88077.1
Prevent-host-death family protein, Putative antitoxin of TAS system; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.405
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.