STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCCytotoxic translational repressor of toxin-antitoxin stability system, Putative toxin of TAS system; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (132 aa)    
Predicted Functional Partners:
CCH88077.1
Prevent-host-death family protein, Putative antitoxin of TAS system; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.976
CCH88075.1
Homologs of previously reported genes of unknown function.
       0.538
CCH87959.1
Prevent-host-death protein, Putative antitoxin of TAS system; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
   
 0.497
CCH87197.1
Homologs of previously reported genes of unknown function.
  
 
 0.477
CCH89575.1
Prevent-host-death family protein, antitoxin of TAS system; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.458
CCH90175.1
DNA binding domain, excisionase family; Function of strongly homologous gene; enzyme.
 
     0.422
CCH88074.1
Isochorismatase hydrolase; Function of strongly homologous gene; enzyme.
       0.417
CCH88078.1
Glyoxalase/bleomycin resistance protein/dioxygenase; Function of strongly homologous gene; cell process.
       0.408
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.