STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88080.1Putative ABC transporter ATP-binding subunit related; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter. (302 aa)    
Predicted Functional Partners:
CCH88079.1
Homologs of previously reported genes of unknown function.
 
   0.956
opuCA
Glycine betaine/carnitine/choline transport ATP-binding protein opuCA; Function of strongly homologous gene; transporter.
 
    
0.792
MODMU_2354
Fragment of putative modular protein: ATP-binding protein (ABC transporter component)(N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
    
0.721
CCH88081.1
Two component signal transduction histidine kinase; Function of strongly homologous gene; enzyme.
 
    0.718
CCH86029.1
ABC sugar transporter ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
 
     
0.705
CCH88082.1
Two component transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator.
 
     0.588
CCH90833.1
Putative ABC-type transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.547
CCH86301.1
Transporter subunit: ATP-binding component of ABC superfamily; Function of strongly homologous gene; transporter.
  
     0.519
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.