STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88118.1Non-specific protein-tyrosine kinase; Function of strongly homologous gene; enzyme. (497 aa)    
Predicted Functional Partners:
wcaJ-2
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
 
  
 0.997
CCH85938.1
Lipopolysaccharide biosynthesis protein; Function of strongly homologous gene; enzyme.
 
 
0.968
epsL
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
 
  
 0.955
CCH88119.1
dTDP-glucose 4,6-dehydratase, polysaccharide biosynthesis protein CapD; Function of strongly homologous gene; enzyme.
 
  
 0.924
wcaJ
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
 
  
 0.915
wcaJ-3
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
 
  
 0.913
CCH88120.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.847
pknB
Two component serine/threonine-protein kinase with PASTA sensor; Function of strongly homologous gene; enzyme.
   
 
 0.718
spk
Two-component serine/threonine-protein kinase PK-1; Function of strongly homologous gene; enzyme.
   
 
 0.718
CCH88122.1
Membrane protein of unknown function; No homology to any previously reported sequences.
  
  
 0.671
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.