STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88123.1Putative GCN5-related N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (358 aa)    
Predicted Functional Partners:
CCH88120.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the DegT/DnrJ/EryC1 family.
 
     0.905
epsL
Undecaprenyl-phosphate galactose phosphotransferase; Function of strongly homologous gene; enzyme.
     0.877
CCH88119.1
dTDP-glucose 4,6-dehydratase, polysaccharide biosynthesis protein CapD; Function of strongly homologous gene; enzyme.
 
     0.876
CCH88122.1
Membrane protein of unknown function; No homology to any previously reported sequences.
       0.781
CCH88118.1
Non-specific protein-tyrosine kinase; Function of strongly homologous gene; enzyme.
 
     0.660
CCH86914.1
Homologs of previously reported genes of unknown function.
  
     0.575
CCH88126.1
Capsular polysaccharide biosynthesis glycosyl transferase; Function of strongly homologous gene; enzyme.
 
     0.430
CCH88110.1
Capsular polysaccharide biosynthesis glycosyl transferase; Function of strongly homologous gene; enzyme.
 
     0.425
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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