STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CCH88133.1Penicillin-binding protein transpeptidase. (1009 aa)    
Predicted Functional Partners:
ftsQ
Membrane anchored protein involved in growth of wall at septum; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 0.991
CCH86426.1
Septum formation initiator; Function of strongly homologous gene; cell process.
  
 
 0.953
CCH90939.1
Peptidoglycan glycosyltransferase (Penicillin-binding protein); Function of strongly homologous gene; enzyme.
 
 
 0.922
mreB
Cell wall actin-like component MreB, Rod shaping protein; Function of strongly homologous gene; cell process.
 
 
 0.921
CCH88874.1
Homologs of previously reported genes of unknown function.
  
 
 0.921
ftsI
Cell division protein FtsI/penicillin-binding protein 2; Function of strongly homologous gene; enzyme.
 
0.914
pbpA
Peptidoglycan glycosyltransferase, penicillin-binding protein A; Function of strongly homologous gene; enzyme.
 
0.910
CCH90052.1
Putative cell division-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
  
 0.904
dacD
Protein of unknown function; Gene remnant; Belongs to the peptidase S11 family.
  
 
 0.900
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
  
 0.898
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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