STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tauDAlpha-ketoglutarate-dependent taurine dioxygenase (fragment); Function of strongly homologous gene; enzyme. (142 aa)    
Predicted Functional Partners:
CCH87582.1
NADPH-dependent fmn reductase.
 
 
  0.948
CCH87556.1
NADPH-dependent FMN reductase; Function of strongly homologous gene; enzyme.
 
 
  0.919
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
     
 0.910
sir
Sulfite reductase [ferredoxin]; Function of strongly homologous gene; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.901
CCH85553.1
Gamma-glutamyltranspeptidase; Function of strongly homologous gene; enzyme.
   
 
  0.900
CCH87836.1
Gamma-glutamyltransferase; Function of strongly homologous gene; enzyme.
   
 
  0.900
CCH89006.1
Putative thiosulfate sulfurtransferase sseB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.900
cysA-2
Thiosulfate sulfurtransferase; Function of strongly homologous gene; enzyme.
    
  0.900
CCH89558.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component; Function of strongly homologous gene; transporter.
  
 0.664
opuAA
Glycine betaine transport ATP-binding protein opuAA; Function of strongly homologous gene; enzyme.
    
 0.525
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.