Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
opuAAGlycine betaine transport ATP-binding protein opuAA; Function of strongly homologous gene; enzyme. (402 aa)    
Predicted Functional Partners:
CCH88142.1
Substrate-binding region of ABC-type glycine betaine transport system.
 
 0.999
proW
Glycine betaine/L-proline transport system permease protein proW; Function of strongly homologous gene; transporter.
 0.999
modB
Molybdenum transport system permease protein modB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
    
 0.862
CCH86187.1
ABC-type proline/glycine betaine transport system, permease component; Function of strongly homologous gene; transporter.
 
 
 0.853
CCH86186.1
ABC-type proline/glycine betaine transport system, permease component; Function of strongly homologous gene; transporter.
 
 
 0.852
CCH87735.1
Osmoprotectant transport system substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
 0.648
CCH87592.1
Amino acid ABC transporter membrane protein (fragment).
 
    
 0.639
CCH86188.1
Osmoprotectant transport system substrate-binding protein; Function of strongly homologous gene; transporter.
 
 
 0.577
CCH88145.1
Cation-transporting ATPase E; Function of strongly homologous gene; enzyme.
       0.550
CCH87418.1
Transporter subunit: permease component of ABC superfamily transporter; Function of strongly homologous gene; transporter.
 
    
 0.505
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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