STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88145.1Cation-transporting ATPase E; Function of strongly homologous gene; enzyme. (847 aa)    
Predicted Functional Partners:
CCH88142.1
Substrate-binding region of ABC-type glycine betaine transport system.
       0.550
opuAA
Glycine betaine transport ATP-binding protein opuAA; Function of strongly homologous gene; enzyme.
       0.550
proW
Glycine betaine/L-proline transport system permease protein proW; Function of strongly homologous gene; transporter.
       0.550
CCH87131.1
Homologs of previously reported genes of unknown function.
  
    0.489
CCH89134.1
Homologs of previously reported genes of unknown function.
  
    0.482
CCH88529.1
Homologs of previously reported genes of unknown function.
  
    0.473
CCH88979.1
Putative ATP/GTP-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
   
 0.465
CCH90153.1
Peptidase S8 and S53 subtilisin kexin sedolisin; Function of strongly homologous gene; enzyme.
  
 0.455
atpE
ATP synthase, subunit c, F0 sector; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 0.450
CCH89608.1
Subtilisin-like peptidase; Function of strongly homologous gene; enzyme.
  
 0.440
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.