STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88165.1Homologs of previously reported genes of unknown function. (317 aa)    
Predicted Functional Partners:
CCH88164.1
Homologs of previously reported genes of unknown function.
 
  
 
0.982
CCH86530.1
Dehydrogenase; Function of strongly homologous gene; enzyme.
 
 
 0.962
CCH87677.1
Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
 
 0.956
CCH88166.1
Hydroxypyruvate isomerase; Function of strongly homologous gene; enzyme; Belongs to the hyi family.
 
     0.893
CCH88171.1
Homologs of previously reported genes of unknown function.
 
     0.841
CCH88167.1
Pyranose oxidase; Function of strongly homologous gene; enzyme.
 
     0.834
CCH88163.1
Putative antibiotic antiporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the major facilitator superfamily.
  
    0.774
CCH88189.1
Pyranose oxidase; Function of strongly homologous gene; enzyme.
 
     0.720
CCH87700.1
Oxidoreductase domain protein; Function of strongly homologous gene; enzyme.
 
  
 0.633
CCH86817.1
4Fe-4S ferredoxin, iron-sulfur binding; Function of strongly homologous gene; carrier.
 
     0.556
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.