STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88166.1Hydroxypyruvate isomerase; Function of strongly homologous gene; enzyme; Belongs to the hyi family. (258 aa)    
Predicted Functional Partners:
CCH88165.1
Homologs of previously reported genes of unknown function.
 
  
 0.905
CCH88164.1
Homologs of previously reported genes of unknown function.
 
  
 0.898
CCH86220.1
Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.875
CCH88163.1
Putative antibiotic antiporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the major facilitator superfamily.
       0.773
gyaR
Glyoxylate reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.767
CCH90543.1
Serine-glyoxylate aminotransferase; Function of strongly homologous gene; enzyme.
     
  0.741
CCH88052.1
2-keto-3-deoxy-L-rhamnonate aldolase; Function of strongly homologous gene; enzyme; Belongs to the HpcH/HpaI aldolase family.
    
  0.720
CCH88171.1
Homologs of previously reported genes of unknown function.
 
  
 0.669
CCH87701.1
Sugar phosphate isomerase domain protein TIM barrel; Function of strongly homologous gene; enzyme.
 
  
 0.595
CCH88330.1
Putative Xylose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 
  
 0.567
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.