Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CCH88167.1Pyranose oxidase; Function of strongly homologous gene; enzyme. (529 aa)    
Predicted Functional Partners:
CCH88171.1
Homologs of previously reported genes of unknown function.
 
     0.880
CCH88165.1
Homologs of previously reported genes of unknown function.
 
     0.832
CCH88157.1
Phthalate 4,5-dioxygenase (modular protein); Function of strongly homologous gene; enzyme; Belongs to the cytochrome P450 family.
    
 0.798
CCH88168.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
    
  0.787
CCH88164.1
Homologs of previously reported genes of unknown function.
 
     0.763
korA
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; Function of strongly homologous gene; enzyme.
     
  0.714
CCH88170.1
Homologs of previously reported genes of unknown function.
       0.703
CCH88169.1
Homologs of previously reported genes of unknown function.
       0.697
CCH88155.1
Transcriptional regulator, TetR family; Function of strongly homologous gene; regulator.
  
 
  0.682
CCH85755.1
Chemotaxis CheW protein, Positive regulator of CheA protein activity; Function of strongly homologous gene; regulator.
  
     0.612
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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