STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH88168.1Alpha/beta hydrolase; Function of strongly homologous gene; enzyme. (331 aa)    
Predicted Functional Partners:
CCH87317.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
 
     0.778
CCH88167.1
Pyranose oxidase; Function of strongly homologous gene; enzyme.
  
    0.776
CCH88169.1
Homologs of previously reported genes of unknown function.
       0.697
CCH88170.1
Homologs of previously reported genes of unknown function.
       0.697
CCH88171.1
Homologs of previously reported genes of unknown function.
       0.697
CCH89465.1
Esterase/lipase; Function of strongly homologous gene; enzyme.
 
     0.631
CCH88173.1
ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein (modular protein); Function of strongly homologous gene; transporter; Belongs to the binding-protein-dependent transport system permease family.
       0.513
CCH88172.1
ABC transporter protein, ATP-binding protein; Function of strongly homologous gene; transporter; Belongs to the ABC transporter superfamily.
       0.503
CCH88174.1
Oligopeptide ABC transporter, permease protein; Function of strongly homologous gene; transporter.
       0.502
CCH88159.1
Alpha/beta hydrolase; Function of strongly homologous gene; enzyme.
 
    
0.499
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.